4D-DIA Quantitative Proteomics

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Conventional proteomic studies conduct qualitative or quantitative protein analysis based on three dimensions after proteolytic digestion: retention time, mass-to-charge ratio (m/z), and ion intensity of peptides. With the development of Trapped Ion Mobility Spectrometry (TIMS) and Parallel Accumulation Serial Fragmentation (PASEF®) techniques, the ion collision cross section (CCS) dimension has been introduced, making 4D proteomics technology the latest quantitative approach.

Application Scenarios: Clinical cohorts with large sample sizes and the need to obtain a proteome with high depth.

Mass Spectrometer: timsTOF Pro Bruker

Reference:

Meier, et al. diaPASEF: parallel accumulation–serial fragmentation combined with data-independent acquisition. Nature Methods. 2020 17: 1229–1236.

https://www.nature.com/articles/s41592-020-00998-0#article-info

Conventional proteomic studies conduct qualitative or quantitative protein analysis based on three dimensions after proteolytic digestion: retention time, mass-to-charge ratio (m/z), and ion intensity of peptides. With the development of Trapped Ion Mobility Spectrometry (TIMS) and Parallel Accumulation Serial Fragmentation (PASEF®) techniques, the ion collision cross section (CCS) dimension has been introduced, making 4D proteomics technology the latest quantitative approach.

Application Scenarios: Clinical cohorts with large sample sizes and the need to obtain a proteome with high depth.

Mass Spectrometer: timsTOF Pro Bruker

Reference:

Meier, et al. diaPASEF: parallel accumulation–serial fragmentation combined with data-independent acquisition. Nature Methods. 2020 17: 1229–1236.

https://www.nature.com/articles/s41592-020-00998-0#article-info

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